oxDNA

Table of Contents

  • Installation
  • Usage
  • Input file
  • Configuration and topology files
  • Relaxing initial configurations
  • Improving performance
  • Efficient GPU usage
  • External forces
  • Observables
  • Umbrella sampling
  • Forward Flux Sampling
  • Events
  • oxDNA Analysis Tools
  • Oxpy
oxDNA
  • Search

© Copyright 2022, Lorenzo Rovigatti, Flavio Romano, Erik Poppleton, Michael Matthies, and Petr Šulc.

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